Search interactions

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Logical operator Sample queries
AND (default) elavl1 AND utr
elavl1 utr
OR (+) elavl1 OR elavl2
elavl1 +elavl2
NOT (-) Hu NOT human
Hu -human
Field Sample queries
Gene gene:hur
Gene symbol gene.symbol:irp
GeneID gene.id:48
Origin origin:"escherichia coli"
Region region:utr
Motif motif:"iron responsive"
Experiment experiment:"uv cross-linking"
Biological function function:splicing
Entrez Pubmed PMID pmid:386275
Interaction ID interaction.id:IMAS000223
Source database source:prd, source:intact
More example Sample query
free text elavl1 human
gene and origin gene:"amyloid beta" origin:human
Filtering by origin (fos AND hur) AND origin:(human OR mouse)

Results

Your query: origin:"escherichia coli"

Showing items: 71–80, Total: 185 items
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Source ID Protein label Protein origin RNA label RNA origin
RCSB PDB 1EQQ SINGLE STRANDED DNA BINDING PROTEIN Escherichia coli 5'-R(* (5MU)P* (5MU)P* (5MU))-3' -
RCSB PDB 2C06 KID TOXIN PROTEIN Escherichia coli 5'-R(* AP* UP* AP* CP* AP)-3' -
RCSB PDB 1XPU Rho transcription termination factor Escherichia coli 5'-R(* CP* UP* CP* UP* CP* UP* CP* U)-3' -
RCSB PDB 1XPR Rho transcription termination factor Escherichia coli 5'-R(* CP* UP* CP* UP* CP* UP* CP* U)-3' -
RCSB PDB 1XPO Rho transcription termination factor Escherichia coli 5'-R(* CP* UP* CP* UP* CP* UP* CP* U)-3' -
RCSB PDB 2I82 Ribosomal large subunit pseudouridine synthase A Escherichia coli 5'-R(* GP* AP* GP* GP* GP* GP* AP* UP* UP* GP* AP* AP* AP* AP* UP* CP* CP* CP* CP* UP* C)-3' -
RCSB PDB 1K8W tRNA Pseudouridine Synthase B Escherichia coli 5'-R(* GP* GP* CP* AP* AP* CP* GP* GP* UP* (FHU)P* CP* GP* AP* UP* CP* CP* CP* GP* UP* UP* GP* C)-3' -
RCSB PDB 1ZL3 tRNA pseudouridine synthase B Escherichia coli 5'-R(* GP* GP* CP* AP* AP* CP* GP* GP* UP* (FLO) UP* CP* GP* AP* UP* CP* CP* CP* GP* UP* UP* GP* C)-3' -
RCSB PDB 2HT1 Transcription termination factor rho Escherichia coli 5'-R(* UP* C)-3' -
RCSB PDB 2HT1 Transcription termination factor rho Escherichia coli 5'-R(* UP* CP* UP* CP* U)-3' -